Friday, January 26, 2024

Generative AI and scientific images/diagrams

Generative AI for image generation is a controversial topic for many reasons.  Still, as someone who doesn't have a staff of graphic artists on hand to help make scientific illustrations, it has certainly been tempting to see whether it might be a useful tool.  My brief experiments are based using bing's integrated engine (which I believe is DALL-E 3) since Rice has a license.  The short summary:  Trying to make scientific illustrations this way is great at showing how this technology is not close to useful yet for this application.  While natively integrated w/ chatGPT, it still cannot parse prompts well, indicating that it doesn't really "know" the meaning of a lot of basic terms and how those relate to its image training data.

Let me give you an example.  When I asked it "Make me an image of a benzene molecule showing the chemical bonds between the carbon atoms", this is the response:  

When I tried to refine this by typing "Make an image of a benzene molecule.", it responded by showing me image search results with sources, which were all correctly benzene, but not an original image.  When I responded "Please create a new image (not from an existing source) of a benzene molecule.", it responded with "Ok, I will create a new image from scratch showing a benzene molecule." and showed me this:

I then tried more specificity in the prompt:  "Create (from scratch) an image of a benzene molecule, which consists of six carbon atoms (black spheres) linked in a ring, with one hydrogen atom (a smaller red sphere) attached to each carbon atom."  The result was this:
Closer, but I'm still surprised at how poorly any of these resemble the stock images of benzene that it correctly found through image searching on the internet.  That last one is particularly close, so I tried "The fourth image is close, but it should have only one hydrogen attached to each carbon, not three."  In classic chatGPT form, the response was "I’m sorry, I made a mistake. I’ll try to create a new image of a benzene molecule with only one hydrogen attached to each carbon. Please wait a moment."  It then produced this:
Clearly it just cannot understand or follow the instructions yet. 

Similar things happen if you ask it to make an image of a lattice.  If I ask "Make me an image from scratch of a simple cubic lattice.", the verbal and image responses are quite encouraging.  "I’ll try to create that. Here is a new image of a simple cubic lattice that I generated from scratch. A simple cubic lattice is a type of crystal structure where the atoms are arranged in a regular pattern of cubes. Each atom is located at the center of a cube and has six nearest neighbors. A simple cubic lattice is one of the simplest and most symmetric types of lattices."

This is quite close, though all of these have problems (non-orthogonal angles, uneven spacings).  Things go off the rails badly, though, if you want a face-centered cubic lattice.  It can say the definition of an FCC lattice reasonably well:  "I’ll try to create that. Here is a new image of a face-centered cubic lattice that I generated from scratch. A face-centered cubic lattice is a type of crystal structure where the atoms are arranged in a regular pattern of cubes. Each atom is located at the center of a cube and at the center of each face of the cube. A face-centered cubic lattice has 12 nearest neighbors for each atom and is one of the most common and dense types of lattices."  However, the images are, ummm, artistic.
These are quite different from the simple image search of the internet for "face-centered cubic lattice", which does a good job if you don't mind using someone else's image.  The bottom line:  These kinds of image generation tools have enormous potential to save us time, but right now the parsing technology and training methods just aren't there yet.  If a simple image search turns up the right targets, but the generation tool can't make images that look like those search results, then training has failed somewhere. 

If anyone out there has found some flavor of these image generation capabilities that really does work well for helping to make scientific illustrations, please let me know.

Update:  Google just released their free image generation tool, and while it still has problems like those above, it's pretty impressive.  For example, here is what it made from the prompt "drawing of a benzene molecule, consisting of six black carbon atoms arranged in a ring, with each carbon atom connected to one red hydrogen atom":

That's certainly better than anything DALL-E made.  Of course, the other three images that came along with that one were all screwed up.  Still, progress.


 


Tuesday, January 16, 2024

Materials characterization techniques – a brief glossary

Suppose someone has synthesized or found what they think is a new material. How do people studying materials (condensed matter physicists, materials scientists, materials chemists) figure out what they have and understand its properties? That's the puzzle-solving aspect of working with materials: In general, solid matter involves an enormous number of interacting particles, and determining even something as basic as its structure and underlying excitations is not simple.

There are many, many materials characterization techniques available, each with its own peculiarities and limitations. (I think that the alphabet-soup collection of acronyms associated with these is part of condensed matter's general perception as complicated, obscure, and full of jargon, but the need for a variety of techniques is clear in practice.) For the class I'm teaching, I wrote up a brief glossary of these. Apologies for undoubtedly leaving out someone's favorite. Please let me know in the comments what I've missed or mis-stated. Wikipedia already does a creditable job explaining many of these, including with diagrams and citations to key literature. Hopefully sticking a lot of these in one place will be useful to some. -- DN

PS - the fact that there are so many different techniques that can be applied just to determine material structure and composition is a hint why trying to automate materials characterization in AI/ML-based materials synthesis and discovery has a long way to go.



Materials characterization techniques – a brief glossary

 

Microscopy

Optical microscopyprovides optical information about structure on scales > 1 μm

 

Electron microscopy and related

Scanning electron microscopy (SEM)electron beam (1-40 keV) rastered across sample; secondary electrons knocked out of the sample are detected as a function of beam position to create an image.  Sensitive to surface conditions, works best on conductive materials, larger signals from high Z materials.  Beam spot size typically nm scale; lateral resolution down to 1-2 nm possible.  Penetration depth into solid of 10s of nm, more with higher electron beam energy.  Typically requires sample in vacuum (or at least detector closer to sample than electron mean free path in background gas).  Best with conductive samples to avoid charging.

Related

Back-scatter electron diffraction (BSED):  back-scattered electrons from the beam used to create diffraction patterns from the surface crystal structure.

Energy (X-ray) dispersive spectroscopy (EDS):  x-ray fluorescence excited by electron beam is detected; can be used for elemental compositional analysis.

Electron microprobe analysis (EMPA): carefully calibrated cousin of EDS, allows precise elemental analysis.

Cathodoluminescence (CL): optical photons collected from e-beam excited sample as a function of beam position.  Can detect excitations of material like plasmons, excitons.

 

Transmission electron microscopy (TEM) and scanning transmission electron microscopy (STEM):  sub-nm spot size electron beam (typically 100 keV and higher) passed through thin ( 100 nm thick) sample into a detector.  Can detect atomic-scale structural information.  EDS, CL can be performed as well. “Bright field” and “dark field” imaging modes possible.  Sample in vacuum.  Special sample holders available to allow measurements as a fn of temperature, strain, electronic biasing,

Related

Selective-area electron diffraction (SAED) – get electron diffraction from portions of the sample.

Electron energy loss spectroscopy (EELS) – measure energy loss of transmitted electrons, can infer excitations (e.g. plasmons) within the material.  Energy resolution down to sub-100 meV possible.

Lorentz electron microscopy (LEM) – can infer magnetic domain patterns from deflection of transmitted electron beam

 

Electron diffraction:

Reflection high energy electron diffraction (RHEED):  diffraction using grazing incidence electrons (10-30 keV).  Extremely sensitive to surface conditions, used for in situ characterization of thin film growth in molecular beam epitaxy (MBE) and pulsed laser deposition (PLD) systems.  Requires vacuum.

 

Low energy electron diffraction (LEED): low energy (20-300 eV) electrons diffracted in reflection off surfaces.  This is the original electron diffraction discovered by Davisson and Germer back in 1924.  Requires vacuum, very surface sensitive (nm scales), vulnerable to magnetic fields. 

Related

Auger electron spectroscopy (AES):   use keV electrons to knock out core electrons; as electron drops down to fill core hole, excess energy kicks out less bound electron, whose energy is measured.  Very surface sensitive. 

Low energy electron microscopy (LEEM) and spin-polarized LEEM (SPLEEM):  Doing electron microscopy using < 100 V electrons; extremely surface sensitive, SPLEEM good for local magnetic structure.

 

Scanned probe microscopy (SPM)

Category of microscopy methods that involves moving a sharp tip in close proximity to a material surface.  Typically involves piezoelectric transducers for sample/tip relative motion and scanning.  Examples:

Atomic force microscopy (AFM):  A sharp tip (down to a few nm in radius) at the end of a cantilever or tuning fork structure is moved relative to the sample surface.  In contact mode, changes in surface topography cause deflection of the cantilever, which is typically detected optically.  In non-contact (tapping) mode, the tip is oscillated at the cantilever resonance frequency.  The short-range interaction between tip and sample alters the frequency and phase of the cantilever motion.  Feedback of tip height above sample is used to maintain tip-sample separation and map topography.  Can be performed in ambient conditions.  If performed in vacuum, with molecule-functionalized tips, it is possible to perform atomic-resolution imaging and “see” molecular orbitals.  Versions of AFM may be performed in fluid environments as well.

Related

Lateral force microscopy (LFM):  looks at sideways forces on tip as it is scanned over the sample surface; sensitive to changes in local friction and elastic properties.

Piezoresponse force microscopy (PFM): uses a conductive tip and an applied ac current to map piezoelectric response of sample.

Conducting probe AFM:  In contact mode, allows mapping of electronic properties of the sample, though care is required for interpretation.

Scanning capacitance microscopy (SCM): Using conductive tip as effective capacitor plate, maps capacitance of sample.  Useful for mapping carrier concentration in semiconductor materials.

Magnetic force microscopy (MFM):  Uses a ferromagnetically coated tip.  Scanning a line in close non-contact mode to get topography, and rescanning back over the line with tip elevated a fixed amount so that long-range magnetic forces are mapped.  One challenge:  magnetic field from tip can perturb magnetic domains in sample. 

Electrostatic force microscopy (EFM): Conductive AFM tip is used and held at a particular potential relative to the sample.  As in MFM, mapping at a fixed tip-sample distance can reveal local electric field forces between tip and sample.

Kelvin probe force microscopy (KPFM): Feedback is performed, so that the conductive AFM tip potential is adjusted to null out any long-range electric field forces between tip and sample.  This can be used to map out the local contact potential or work function difference between tip and sample.   

Magnetic resonance force microscopy (MRFM): Uses radio frequency (RF) excitation and a magnetic tip to drive magnetic resonance (either electron spin resonance or nuclear magnetic resonance) of spins in the sample, detected via the cantilever motion. 

 

Near-field scanning optical microscopy (NSOM or SNOM): Using AFM-like control, a tip is brought into close proximity (nm to tens of nm) of the sample surface.  Near-field optical interactions are then mapped as a function of tip position.  Tip can be a tapered optical fiber or a contain a hole/waveguide, so that light travels through the tip to the sample surface.  Scattered light can be detected back through the tip or in the far field.  Alternately, light can be shined in via the far field and scattered into the tip or into another far-field detector.  Key idea is that the very small tip and tip-sample distance can scatter sub-diffraction-limit information into the far field.

Scanning single-electron transistor microscopy (SSETM): A tip is prepared (e.g., on a drawn optical fiber) with a single-electron transistor (SET, a device based on “Coulomb blockade”, consisting of a metal “island” with tunnel junctions to a source and a drain electrode, sometimes with an additional “gate” electrode that is capacitively coupled to the island) at the tip apex.  The tip is positioned close to the sample using AFM-like techniques to avoid crashing into the surface.  The electronic transport through the SET as a function of biasing conditions and the tip position.  The surface potential of the sample acts as a “gate” that modulates conduction through the island in the Coulomb blockade regime.  By modulating the tip position and biasing conditions, can be used to measure local charge density and electronic compressibility.  Typical spatial resolution 10s of nm at best, because of diameter of island and positioning precision.  Requires cryogenic temperatures to operate.

Scanning SQUID microscopy: A superconducting quantum interference device (SQUID) is fabricated on a tip (e.g., on a drawn optical fiber).  The tip is again positioned near the sample using AFM-like techniques.  The SQUID, consisting of a superconducting loop with Josephson junction weak links, is used to detect magnetic flux from the sample.  This can be used to map current distributions in operating devices.  Requires cryogenic temperatures to operated, does not work well with magnetic fields.

Scanning Hall probe microscopy: A 2D electronic system is patterned into a Hall configuration on some kind of tip and positioned (using AFM-like methods) close to a sample of interest, to act as a magnetic field detector. 

Scanning NV center microscopy:  A nitrogen-vacancy center in a diamond crystal has optical transitions that are highly sensitive to local magnetic fields.  Incorporating NV centers into diamond films on SPM tips enables high resolution (tens of nm) measurements of local fields including direction, and the inference of current distributions.

Microwave Impedance Microscopy (MIM): A microwave resonator is made and incorporated so that a conductive AFM-like tip is part of the resonant circuit.  Scanning the tip over a device changes the Q of the resonator, allowing mapping (with 10s of nm resolution) of the microwave frequency (say hundreds of MHz to GHz) dielectric properties of the sample. 

Scanning thermal microscopy (SThM): Scanning a special temperature-sensitive probe tip over a sample to assess local thermal conduction properties or local temperature.  Several variants depending on the type of thermally sensitive probe used (e.g. thermocouple, phase change material, optical defect center with T-dependent lifetime).

 

Scanning tunneling microscopy (STM):  Tunneling current between metallic tip (sometimes Pt, W) and conductive sample used for z-positioning feedback.  Because of the exponential distance dependence of tunneling, atomic resolution is possible.  Can be performed at ambient conditions, but by far the best results are obtained in vacuum and at low temperatures. 

Related

Scanning tunneling spectroscopy (STS):  At each tip position over the sample, z feedback is turned off and tunneling I-V curves are obtained at a nominally fixed tip height (usually including dI/dV vs. V and sometimes d2I/dV2 vs. V).   The d2I/dV2 vs. V data is used to perform inelastic electron tunneling spectroscopy (IETS), and can detect local excitations like vibrations.

Quasiparticle interference (QI):  From STS maps, spatial Fourier transforms of the (fixed energy) maps of conductance vs. position are performed.  For itinerant quasiparticles that can move around on the sample surface, quantum interference between trajectories that bounce off scattering sites and the tip mean that the QI transforms make it possible to infer E(k) for the surface states of the sample. 

Spin-polarized STM (SPSTM): Requires a magnetic/spin-polarized tip.  Can reveal local magnetic information due to spin-dependent tunneling between tip and sample.

 

X-ray methods

X-ray diffraction (XRD):  gives crystal structure (spatial frequencies of atomic stacking) of materials via coherent scattering of x-rays.  Powder XRD = gives bright rings as a function of angle away from forward scattering (linear combination of many spots).  Obeys Bragg condition.  Single-crystal XRD = gives discrete spots.  A Laue single-crystal diffractometer can be used to find the crystal orientation of single crystals.

X-ray reflectometry (XRR):  rather like optical ellipsometry; looking at x-ray reflections at grazing incidence with respect to a multilayered surface.  Can be used to infer layer thicknesses (assuming there is x-ray contrast between different layers)

X-ray absorption spectroscopy (XAS) and x-ray absorption fine structure (XAFS):  Using tunable x-ray sources (e.g. beam from a synchrotron), it is possible to measure x-ray absorption in detail, allowing determination of chemical structure and valence in materials.  Also related: x-ray absorption near edge structure (XANES), gives more detailed chemical information.

Inelastic x-ray scattering (IXS): Angle- and energy-resolved x-ray scattering, allowing measurement of absorption edges and detection of excitations launched in the material at some known energy and momentum transfer.

Resonant inelastic x-ray scattering (RIXS):  Angle- and energy-resolved x-ray scattering where the incident wavelength is chosen to be close to an x-ray line of an element in the target.  Needs tunable x-ray source (free electron laser (FEL), e.g.)  Since it is sensitive to electron density, it can be used with small sample volumes, and can be used to look for dispersive excitations in the material.  There is hope that RIXS can be used to detect magnetic excitations as an alternative to neutron scattering for small amounts of sample material. 

X-ray magnetic circular dichroism (XMCD): Difference of XAS between left- and right-circularly polarized x-ray beams.  Can be used to infer magnetic moments of atoms in the sample.  Can be resonantly enhanced if x-rays are chosen to be at transitions of the core electrons of the magnetic atoms in the material.  Typically needs a synchrotron to get high brightness beams.

Related

X-ray magnetic linear dichroism (XMLD): Difference of XAS between x- and y-polarized x-ray beams.  Closely related to XMCD, useful for looking at charge order and orbital order in magnetic materials.

 

Photoemission

X-ray photoemission spectroscopy (XPS) and ultraviolet photoemission spectroscopy (UPS):  Uses x-ray or UV light to eject electrons from sample and analyzes the energy of the ejected electrons.  This gives the energies of the core levels of the constituents relative to the vacuum, which encodes the valence state of the elements.  Sample in vacuum.  Surface-sensitive, very useful for determining chemical composition.  Can be combined with etching to do depth profiling of composition. 

Related

Inverse photoemission spectroscopy (IPES): Low energy (< 20 eV) electrons interact with low-lying unoccupied electronic states, sometimes generating emitted photons.  Probes states above the Fermi level of materials. 

Photoemission electron microscopy (PEEM):  With a scannable optical source, it is possible to map spatial nonuniformity in photoemitted electrons.

 

Angle-resolved photoemission spectroscopy (ARPES):  Uses incident x-rays or UV at precisely known energy and momenta to eject electrons from sample; hemispherical analyzer is used to measure energy and momenta of ejected electrons with high precision (energy resolution can be as sharp as 1 meV in synchrotron facilities).  Sample in ultrahigh vacuum, typically requires surfaces cleaved in vacuo. This is the primary technique for measuring electronic band structure.  Like all photoemission techniques, it works best on conductive samples to avoid charging problems.  Variations include spin-polarized ARPES (polarization of detected electrons is found) and time-resolved ARPES (optical pump followed by time-delayed x-ray/UV pulse to do the photoemission).  There is also a related technique in terms of hardware called momentum-resolved EELS, where incident electrons of known energy and momentum are bounced off the material of interest and their final energy and momenta are measured.

 

Neutrons

Neutron diffraction:  Neutron scattering, requires beam of monoenergetic neutrons (prepared from a reactor via moderation + diffraction off a known crystal to act as a monochromator) (or broad-band neutrons but with time-of-flight to assess neutron energy).  Sensitive to lattice structure (nuclei).  Magnetic dipole interactions with electrons allows neutron diffraction to be sensitive to magnetic order.  Variations:  cold neutrons (prepared by scattering off cryogenic material) for higher sensitivity to magnetic systems; polarized neutrons, with polarized detection for higher sensitivity to magnetic systems.  Because neutron scattering cross-sections are generally small, neutron scattering historically requires large quantities (many milligrams) of material, and single-crystal diffraction is typical (with magnetic structure measurements requiring careful alignment of sample material via XRD first).  High brightness sources are improving the situation. Another challenge:  some elements and isotopes have large absorption cross-sections for neutrons and thus cannot readily be measured via neutron scattering. A positive flipside of this is that neutron scattering is very sensitive to hydrogen and lithium, of interest in batteries and other energy-related applications.

Related

Inelastic neutron scattering (INS):  Momentum- and energy-resolved neutron scattering, with change in neutron energy and momentum recorded.  Similar in spirit to ARPES, for mapping out dispersion relations of excitations within the sample material.  This is the primary method of tracing out phonon dispersions in solids, as well as the means of identifying and quantifying magnons.  Spin-polarized INS is possible, though any neutron scattering technique that requires preparation or detection of neutrons in particular spin states is more demanding (takes longer, requires higher initial flux) because of loss of neutrons during preparation and detection. 

Neutron reflectometry:  Diffraction of reflected neutrons, rather analogous to EBSD, though also sensitive to magnetic scattering.

Small-angle neutron scattering (SANS):  Analogous to SAXS, but with grazing-incidence neutrons.  Strongly sensitive to light elements (because they have bigger neutron scattering cross-sections) and magnetic structure.

 

Optical spectroscopy

Note that many optical techniques can be combined with microscopy to achieve spatial resolution and mapping of responses over sample surfaces.  A good review article on some of these is this.

UV/Vis/IR absorption:  A sample is illuminated in a transmission geometry with broadband light, and by measuring the transmitted spectrum, electronic transitions can be identified and band structure can be constrained.  Selection rules constrain what transitions can be seen.

Fourier transform infrared (FTIR) spectroscopy and microscopy:  Using a broadband mid- to far-IR light source and incorporating the sample into one arm of an interferometer, it is possible to measure absorption out to longer wavelengths (10 μm, e.g.).  Good for identifying “infrared active” (e.g. involving polar displacements) low energy vibrational modes in solids.

Ellipsometry and spectroscopic ellipsometry: Incident light of known wavelength, measuring reflected light from a surface as a function of angle of incidence (and wavelength of incident light, in the spectroscopic case). Allows determination of dielectric function/index of refraction, interpretation through modeling.  Great for quantifying layer thicknesses for dielectric multilayers.

THz spectroscopy:  Using THz sources and detection, can look at transmission and reflection in the mm-wave (very far IR; not quite the microwave).  Great for identifying vibrational modes, low-energy excitations as in superconductivity and some magnetic states. CW sources now exist for THz using quantum cascade lasers. Time-resolved THz (THz time-domain spectroscopy) is often used, as broadband THz pulses can be created using pulsed lasers and photoconductive antennas. 

Optical conductivity:  By measuring real and imaginary parts of the dielectric function (through light scattering, ellipsometry, absorption measurements) and using the Kramers-Kronig relations, it is possible to infer the frequency-dependent conductivity σ(ω), which can reveal a lot about dynamics of charged excitations.

Faraday rotation:  In transmission, the polarization of light can be rotated due to magnetization of the sample.  Provides information about magnetic structure of materials.

Magneto-optic Kerr effect (MOKE):  In reflection, the polarization of light can be rotated due to magnetization of the sample. 

Raman spectroscopy:  This is inelastic light scattering, often applied to molecules or optical phonons in solids.  An incoming photon of angular frequency ω0.  Elastic scattering is called Rayleigh scattering.  If the photon excites a vibration or another excitation of energy ℏω, the (“Stokes”) scattered photon comes out with frequency ω0 – ω.  If the system is already excited, the (“anti-Stokes”) scattered photon can grab energy from the excitation and come out with frequency ω0 + ω. Raman scattering can take place if the polarizability tensor of the system α depends on the displacements of the atoms.  In Raman spectroscopy of solid crystalline materials, with polarization control of the incoming light and known incident angle vs. the crystallographic orientation, it is possible to gain insight into dispersion of excitations.  Detection is usually done with a grating spectrometer + CCD or CMOS camera.  Variation: magnetoRaman, where sample is in an applied magnetic field.

Brillouin light scattering: Inelastic light scattering at quite low energy transfers, better suited for looking at acoustic phonons, magnons, etc. in solids.  Energy transfers are sufficiently small that detection is usually done with an interferometer.

Photoluminescence (PL): Optical spectroscopy in which incident light electronically excites the sample, and the sample then emits photons of energies characteristic of the electronic excitations. This is a standard way to characterize excitons and related excitations in semiconductors. Variations include time-resolved PL (to look at dynamics of excitations and their lifetimes) using pulsed excitation and timed detection; and two-photon PL (TPPL), in which high intensity lower energy excitation is used to nonlinearly excite the sample. (Nonlinear optical processes depend critically on symmetries of the underlying material.) When applied to molecular systems (or semiconductor nanocrystals) in the context of chemistry, PL is often referred to as fluorescence spectroscopy.

 

Electronic transport

I-V characterization: Measuring the current as a function of voltage (or voltage as a function of current).  Depending on the material involved, considerable information may be inferred from such data.

Magnetoresistance/magnetoconductance:  Measuring electrical resistance or conductance as a function of applied magnetic field and temperature.  Conductance measurements = source a voltage, measure a current.  Resistance measurements = source a current, measure a voltage.  Best practice, if possible, is to perform a 4-terminal (or more) measurement, with current sourced via two leads and voltages measured with other leads.  Since an ideal voltage probe draws no current, contact resistances do not interfere with the voltage measurement. 

Differential conductance/differential resistance:  For differential conductance (dI/dV), the applied bias includes a small ac voltage in addition to an applied dc voltage Vdc, and an ac measurement (via a lock-in amplifier) allows the detection of the ac contribution to the current; this allows measurement of dI/dV as a function of Vdc.  Similarly, for differential resistance (dV/dI), the applied bias includes a small ac current in addition to an applied dc current Idc, and an ac measurement via lock-in allows detection of the ac contribution to the voltage; this allows measurement of dV/dI as a function of Idc.  Note that differential resistance measurements are appropriate for examining candidate superconductors, when it is possible that the sample may support nonzero current with zero voltage.

Hall effect:  By measuring longitudinal and transverse resistance (RxxVxx/Ix, RxyVxy/Ix) in the presence of a perpendicular magnetic field Bz, it is possible to infer the sign of the charge carriers, charge mobility, and carrier density (assuming an isotropic single-band conductor). 

Tunneling spectroscopy:  In a tunnel junction (between a conducting sample and a normal metal probe electrode), at zero temperature the differential tunneling conductance dI/dV is proportional to the electronic density of states of the probe at its Fermi energy and the density of states of the sample at E = EF,sample-eVdc, where Vdc is the bias voltage of the probe relative to the sample.  (For a superconducting probe, the probe density of states is very sharp but is also shifted relative to the normal state EF because of the superconducting energy gap.)

Related

Inelastic electron tunneling spectroscopy (IETS): Conventionally, in tunneling spectroscopy, when the bias energy scale eVdc crosses the energy ℏω required to inelastically excite an excitation of the sample, this adds a possible path for electron transport.  The result is a kink in I-V, equivalently a step in dI/dV vs. Vdc, and therefore a peak in d2I/dV2 (at positive Vdc) at Vdc=ω/e. A real excitation of the sample should result in antisymmetric d2I/dV2 features at Vdc ω/e.  This approach has been used to identify vibrations in molecules, optical phonons in solids, and also magnetic excitations in solids.  The IETS features are broadened by the finite electronic temperature (kBT), so cryogenic temperatures are best suited for this technique.

 

Thermodynamic and thermal measurements

Specific heat:  Adding a small amount of thermal energy to a sample via a heater and measuring the temperature rise of the sample using a local thermometer.  Because of the relationship between specific heat and entropy (Cp = (1/T)(∂S/∂T)|p), the specific heat as a function of temperature may be used to infer entropy.  First-order phase transitions show up as a huge feature in specific heat vs temperature, since the entropy is discontinuous across a first-order transition.  Second-order phase transitions show up as a singular feature (discontinuity) in heat capacity vs temperature because (∂S/∂T) is discontinuous across such a transition, and will show critical fluctuations approaching the transition temperature.  Specific heat of metals is linear in T at low temperatures and is used to infer the electronic density of states at the Fermi level.

Related

Differential scanning calorimetry (DSC): Temperature is measured as heat input to the sample is scanned.  Intended to reveal phase changes within the material.

Thermal conductivity: A known thermal energy current is applied through a sample, and the temperature drop across the sample is measured using local thermometers.  This is a measure of the transport of energy by all mobile excitations in the material.  In conductors, charge carriers are expected to transport an amount of energy proportional to their specific heat, leading in metals to the Wiedemann-Franz relation.

Thermal expansion: Changes in sample dimensions as a function of temperature are measured, giving insights into material structure and bonding.  Typically, thermal expansion relates to the anharmonicity of the interatomic potential, and it is related therefore to nonlinearities in the properties of phonons (see the Grüneisen parameter).

Thermopower/Seebeck coefficient:  Absolute Seebeck response = the change in voltage across a sample is measured as a function of the temperature difference imposed across the sample.  Electronic excitations (and phonons) tend to diffuse away from the hot side.  Seebeck response sign generally depends on sign of the charge carriers (electron-like or hole-like).  The Seebeck response in a conductor is proportional to the energy dependence of the conductivity (and hence the mean free path) of the carriers.

Nernst-Ettingshausen effect:  In a Hall-like geometry, the transverse voltage across a sample Vxy is propertional to the temperature gradient along the sample dT/dx and the mutually perpendicular magnetic field Bz, so that the Nernst coefficient is defined as ν = (Exy/Bz)/(dT/dx).  This gives information about the transverse scattering of heat-carrying excitations in the presence of a magnetic field.

 

Magnetic measurements

Magnetization: Measurements of M vs H may be performed using SQUID-based and other magnetometers, though knowledge of sample dimensions and geometry are required.  Characteristic features of M are expected for certain material types.  For example, near zero field, a superconductor is expected to show perfect diamagnetism.  Often measurements are also made of M vs T at fixed H, comparing field-cooled and zero-field-cooled responses.  Saturation of M vs H at low temperatures and high fields can reveal the magnetic state of elements hosting local magnetic moments.

Vibrating sample magnetometry (VSM): a particular type of magnetometer that vibrates the sample back and forth through pickup coils.

AC susceptibility:  An oscillating component of H is applied and the change in M is measured.

Nuclear magnetic resonance (NMR):  liquid (for molecules) or solid-state.  Applied magnetic field provides Zeeman energy splitting for spin states of nuclei, radio frequency pulse sequences (and continuous wave methods) used to determine nuclear spin properties (and because of hyperfine couplings, provides information about electronic states).  Specific effects in superconductors (Knight shift).  Care must be taken with conducting samples, as microwaves don’t necessarily penetrate into the bulk of the material.

Electron paramagnetic resonance (EPR) or electron spin resonance (ESR):  Applied magnetic field provides Zeeman energy splitting for spin states of electrons, microwave pulse sequences (and continuous wave methods) are applied to do spectroscopy of these.  Best in insulating materials with unpaired electrons.  Particularly handy in determining the g factors for local magnetic moments, which is affected by crystal fields (local chemical bonding environment) at the local spin-carrying atoms. 

Ferromagnetic resonance (FMR): Conventionally, a radio frequency/microwave drive is applied to make the ferromagnetic magnetization M of a material precess around an external magnetic field.  Gives information about the magnetization dynamics and damping.  Recently, FMR in small devices has been driven via spin currents (from the spin Hall effect/spin-orbit torques or  spin transfer torques).

Mossbauer spectroscopy: This is really a nuclear physics-based technique, but given that the most famous Mössbauer material is iron, it has relevance for magnetism.  Gamma-ray spectroscopy using the Mössbauer effect (collective recoil or lack thereof of the entire lattice rather than individual atoms), gives extremely precise energetic information about nuclear environment of the particular isotopes, including hyperfine interactions.

Muon spin spectroscopy (μSR): Muons produced via an accelerator are implanted or transmitted through a material of interest. Decay of positive muons leads to emission of positrons, with directional asymmetry of emission related to the spin state of the muon. These measurements this give information about the magnetic environment within the material. Does not require pulsed fields.

 

Other techniques to assess composition

Secondary ion mass spectrometry (SIMS): Material is sputtered away from the sample, and the fragments are analyzed using mass spectrometry (e.g., ionized fragments are accelerated and curved in a magnetic field for detection, to determine their charge to mass ratio).

Inductively coupled plasma mass spectrometry (ICP-MS): Using an inductively coupled plasma source to ionize sample material for MS.

Atomic emission spectroscopy (AES): Material is heated or otherwise excited, and the emission spectra of the products is measured.  Modern version of old approach of looking at the color of flame produced by a bit of material.

Rutherford backscattering spectrometry (RBS): Ions (protons, alpha particles) are fired at the sample material and back-scattered ions are detected; can give depth-dependent compositional information.

Thermogravitic analysis (TGA): Destructive technique.  The sample is placed in a sensitive balance and heated through its decomposition, and the sample is weighed as the temperature is swept.  Different breakdown products will be produced at different temperatures.  Often combined with mass spectrometry to determine the molecular weight of the evolved products.


Other surface characterization methods

Helium atom scattering (HAS):  Diffraction of helium atoms off surfaces.  Extremely surface sensitive.

Field ion microscopy (FIM): A sharp tip is biased up to a high voltage.  Gas molecules impinge on the tip, ionize due to the strong electric field, and are repelled away to a detection screen.  Amazingly, this can give atomically precise information about the configuration of atoms at the tip.